Trajectory representation for the first non-trivial mode of the molecule motion based on Normal Mode Analysis.

Protein-Protein Interaction
Protein-Protein Interaction

Vector field representation of molecule for the first non-trivial mode of the molecule motion based on Normal Mode Analysis.

Protein-Protein Interaction
Protein-Protein Interaction
Protein-Protein Interaction
Dynamical Cross-Correlation Map (DCCM)

All modes were used to calculated the residue cross-correlation.

Correlation map revealing correlated (red) and anti-correlated (blue) regions in the protein structure.

Assuming: Cab = Correlation between residues a and b

If Cab = 1 the fluctuations of residues a and b are completely correlated (same period and same phase), if Cab = -1 the fluctuations of residues a and b are completely anticorrelated (same period and opposite phase), and if Cab = 0 the fluctuations of a and b are not correlated.

Protein-Protein Interaction
Correlated Residues
Residues Correlation between 0.8 and 1
Residues Correlation between 0.6 and 0.8
Residues Correlation between 0.4 and 0.6
Anti-correlated Residues
Residues Correlation between 0.-6 and -0.4
Residues Correlation between 0.-4 and -0.2